Complete Genome Assembly of a multidrug-resistant Yersinia enterocoli... - SRA

SRX10338424: Complete Genome Assembly of a multidrug-resistant Yersinia enterocolitica Y72 from a 2019 outbreak in Sweden
1 ILLUMINA (Illumina HiSeq 2500) run: 5.4M spots, 1.6G bases, 480.5Mb downloads

Design: Purified genomic DNA was analyzed and quantified with 2100 NanoDrop Spectrophotometer and Qubit 2.0 (Thermo Scientific).

Submitted by: Uppsala university

Study: Complete Genome Assembly of a multidrug-resistant Yersinia enterocolitica Y72 from a 2019 outbreak in Sweden

PRJNA698800 • SRP310539 • All experiments • All runs

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Here, we report the complete genome of Yersinia enterocolitica bioserotype 4/O:3 strain Y72, a clinical strain isolated from a Swedish patient from a Yersinia outbreak in 2019. The genome consists of a 4,567 290-bp circular chromosome, a 71,773-bp virulence plasmid and 5681-bp plasmid. This isolate harbored a multi resistance cassette in the chromosome containing cat1A, aadA1, sul1 and a heavy metal resistant region. In addition, a plasmid encoding tet(B) conferring tetracycline resistance.

Sample:

SAMN17740595 • SRS8457871 • All experiments • All runs

Organism: Yersinia enterocolitica subsp. palearctica

Library:

Name: ERS5652596

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: unspecified

Layout: PAIRED

Runs: 1 run, 5.4M spots, 1.6G bases, 480.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR13960196	5,364,739	1.6G	480.5Mb	2021-03-14

ID:: 13466369

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